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I can only remove noise for the most part, but I'm not that great. I will try to get someone who's good at it to post here eventually.

Anyways, I've sorta stopped scanning at the moment, turns out my random lockups while using GREYc is due to my q6600 overheating (it idles at 55c[!?!?!]), so I gotta replace the heatsink/fan before I can figure out a good combo for wraith's scans on GREYc. Besides that, cleaning scans is a lot like black magic to be honest. Before using GREYc I used to just play around with built in photoshop filters. If I remember right I used blur, blur more, median after resizing a 600dpi scan in to 300 or 150.